haha! commit

generatebib.js

@@ -0,0 +1,222 @@
+/*
+ MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM$$ZZZZZZ$$$ZZ$$$ZMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
+ MMMMMMMMMMMMMMMMMMMMMMMMMM$$$$ZZ$$$$$$$$$$Z$$$$$$$$$$ZMMMMMMMMMMMMMMMMMMMMMMMMMM
+ MMMMMMMMMMMMMMMMMMMMMMZZOZZ$$$$Z$$Z$ZZ$Z$Z$$$$$$$7$$$$$$$MMMMMMMMMMMMMMMMMMMMMMM
+ MMMMMMMMMMMMMMMMMMMZOZ$Z$$ZZ$Z$Z$$Z$$$$$$$Z$$$$$$77$$7$$$$77MMMMMMMMMMMMMMMMMMMM
+ MMMMMMMMMMMMMMMMM$$$$$$Z$$ZZZZZZZ$Z7$$$Z$$$$$$$$$$$7$7$7777777OMMMMMMMMMMMMMMMMM
+ MMMMMMMMMMMMMMMO$$$$$$$$$Z$$$Z$Z$$$$$Z$$Z$$$$77$77$$77777777I7778MMMMMMMMMMMMMMM
+ MMMMMMMMMMMMM$$$$7$$$$$$ZZ$$Z7$$Z$$$$$$$$$$$7$77$$7777777777I7II7INMMMMMMMMMMMMM
+ MMMMMMMMMMMZ$$$7$7$7$$$$Z$$$Z$ZZZ$$$7$ZZ77777$$7$$$7777IIII7IIII????MMMMMMMMMMMM
+ MMMMMMMMMM7$$$77$$$$77$$$$$$Z$$$$$7777IIIII$7$Z7777$$77I$7II??+???+++MMMMMMMMMMM
+ MMMMMMMM877$777$$$$$7$$$Z$$$$$$$$?II?I?I?II???7$ZZ$$7777I7I????++??+++=MMMMMMMMM
+ MMMMMMMO$7$$$7$$$$$$$7$ZZZ$$$$$I7I+I?I?I?I$II$7$ZZ$O7$II7III?I??+?+?++++MMMMMMMM
+ MMMMMM$$77$7$$$$$$$7$$$Z$ZZ$$$7=====+=++++++??I?ZO$OZ$77III?I++?+++++==+~MMMMMMM
+ MMMMMZ7777$$$$Z$$$7$ZZZZ$ZZ$Z$+======+++++++??I?IZZZ8O7I7I????++??++++==++MMMMMM
+ MMMM87777$7$$$$$$Z7$ZZZZZ$ZZZI======+=++?????IIII$DO8D$7?I??+++++++++++++++MMMMM
+ MMMM7$7$7777$$$$$ZZ$$ZZ$Z$ZZ$+==++++++++?I?II7?77Z88D8OI????++?+??+++++++++7MMMM
+ MMM77$7$$77$$$$$Z$ZZZZOZZZZZZ+?777~=+==$7$77$777$ZOOOND77II?+???+++?++++++++MMMM
+ MM8?7$77777$$$$$ZZZ$ZZOZZZZZO=7+?$$77+I7?7888Z$ZZZO8DDD$II?????+?++++?+++++++MMM
+ MMI77$7$$7$$$$$ZZZZOZOOZZOOZO+7ZDZZ8I7O8O8OODOOZZ888NNZII??????+?++?++++?++++NMM
+ M$II$$$$$$$$Z$ZZZZZZZOZZOOZOZI7I77$I+IZO8OZOO$$ZO88NZ8DZ7?I???+???+++++++++++~MM
+ MII777$7$$Z$Z$ZZZ$ZZZZZZOOZZZ++++???=IZZ$7$$77$ZO8DNN8DD7I????????????+?+?+++=MM
+ M?I777$$$$$ZZZZZ$ZZOOOOZOOZZO???I$+77$Z$Z77$7$ZOOD8ODO8I7I?III?++??+?=++?+++++~M
+ Z?III$$77$$$$$$ZZZZZZZZOZOOOZ+?I7$7DDNDM$$$$$ZZ8888DZ8$7II??I?I+????+?+??+++?==M
+ ?????77$$$$$$Z$$Z$ZZZZO88OOOO7I7$ZZ7NNN88Z$OZOODD8D8D7$77??I?I???????????+++++=M
+ II?I?77$$$$Z$$Z$Z$ZZZOOOOZO8OZI$$O8NMNNNMN8O88DNONZ7$$7III?II?I?????++??++?++++M
+ ????I77$$$$$Z$ZZZOZZOOO8O8OODO7Z8NDZZ8MNN8N88DDNND$$77777III?????I?????+?+?++++M
+ IIIII777$ZZ$Z$ZZZZZZOOO8OOOO8O8ONDZDN8DNMNNNNNNND8$$77$I7I7IIIIIII??I?????+?+++N
+ II7I777Z$$$$$$$$$ZZZOOO8OOOOD8Z$Z$OO88DNNDMNDNNNDON7$77$7IIIIIIII??????+????+++N
+ III777$$$$$$Z$$$ZZZZZO8888O8DOZ7ZIZDO8N8DDDNNND887NN$$77777IIIII?????+???++++++M
+ ?II7I77$$Z$$$$$$$ZOZZO88O88ODO7III8ZON8DDMDNDD8N7IZDND87777IIIII?I?????????+?+?M
+ $7I77$7$$Z$$$$Z$$ZZ$OOZOZOO88Z$?I$ZZ8DDOONNND877II7DNNDDDD$IIII???????????+??+=M
+ N777$$$$$$$$$$$$Z$ZZOOOOZ$ZO8ZZ$7$OODDNNDNDDD$7I?IDDNDDNDDDDD$I?+?????????????+M
+ M777$7$$ZZZZZZ$$Z$ZZ$7ZZOOOOOOZO8+OZO8NDDDDZ$7I??78NNDNDNNDDD888Z????????????+MM
+ M$$$$$7Z$ZZZZZ$$$7$$ZZZOOOODO8OODO+=$$O8OOZ$77??+DDDNNDDDNNDDDD88DDO??????+???MM
+ MM7$7$Z$$$Z$ZZ$7OZOZO8O88Z8OOZ88NO8ODMDNDDMNN8I?8DDNDDDDDNDD8DD8D888OOOI????+DMM
+ MM$7$$$$$$$Z$Z$ODOZODD88O88OODODND8DNMDDMNDDDD+DDDDDDD88DDNDDDDD8DDD8888Z??+=MMM
+ MMM7$$$$$Z$ZZZZOD888D8O88DD8ND88ND88NN?I7$$O$I$DDDDDD8NNDDDDDDD8DD888888O??+MMMM
+ MMMM$$Z$ZZ$ZZZ888OD8DD88ODDZDD8D8NDO7?++++$?+?8D8DNDDD8NNDDDDDD88DD888888Z+OMMMM
+ MMMMO$$OZ$OZZOO8888888OZO8Z8DD8O8NDOO+++++++=8DDDDDDD8DDDDD8DDD888888888OO+MMMMM
+ MMMMM$$ZZZOZ$Z8888O88OZZO88O8888DDD8OZ++=+++88DNNDDDDDDDNDDD8D8DDD888888OOMMMMMM
+ MMMMMMZZZZZ$O8O88DO88ZZOOO888O88DDD8OO++==~OO8DNNDD8DDDDND88DDD88888888O8MMMMMMM
+ MMMMMMMOZZZ$OO88DD88ZO7ODO888888D8DD8OO$==888DDDDDZDDDNDDD8DD88DD888888OMMMMMMMM
+ MMMMMMMM$Z$O8888D888ZZ$88O888OO8DDDDOO88=O8O8DN8D8O8DDD8D888D8DD8888O8OMMMMMMMMM
+ MMMMMMMMMMZO8OO8888OZ$OO88D88OO8D8D8D88888DODDDD8D8NDDDDD8D8D8DDDDO8O8MMMMMMMMMM
+ MMMMMMMMMMMO8O8O8D8OZ$O8888DDDO888DN888888888DD88DD8D8DDD8D88888D888MMMMMMMMMMMM
+ MMMMMMMMMMMMMOO888OZ$ZO88DDDDN8888D8NDD8DDODDD8DDDDDDDD88DD888D88ZOMMMMMMMMMMMMM
+ MMMMMMMMMMMMMMD888ZZ$OO888DDDNDN8D8DDDDDM88888NNDDDDDD8D8888D8D88MMMMMMMMMMMMMMM
+ MMMMMMMMMMMMMMMMOOZZZO88888DDDDDDDD8DDDD888DNNNDDD888D8D88888DOMMMMMMMMMMMMMMMMM
+ MMMMMMMMMMMMMMMMMMMOO8888D88D8D8D8DDDDDDDNDNDDDDD888888O8888NMMMMMMMMMMMMMMMMMMM
+ MMMMMMMMMMMMMMMMMMMMMMO88888DDD8DDDDDD88DDDNDDDD888888D88OMMMMMMMMMMMMMMMMMMMMMM
+ MMMMMMMMMMMMMMMMMMMMMMMMM88888O88D8DDD8D8DDDDD8D888OZOMMMMMMMMMMMMMMMMMMMMMMMMMM
+ MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMO888888D888DD888OOONMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
+ MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
+ author: gauthiier.info
+ */
+
+var fs = require('fs');
+var _ = require('underscore')._;
+var CSL = require("./lib/citeproc").CSL;
+
+var conf_default = {
+    locale : "en-US",
+    style : "chicago-note-bibliography",
+    output : "html",
+    csl_path : "csl/",
+    csl_locales_path : "csl-locales/",
+    items : "all",
+    sort : true
+};
+
+var conf = JSON.parse(fs.readFileSync('config.json', 'utf8'));
+conf = _.extend({}, conf_default, conf);
+
+var locales = {
+    'en-US': fs.readFileSync('csl-locales/locales-en-US.xml', 'utf8'),
+    'English': fs.readFileSync('csl-locales/locales-en-US.xml', 'utf8'),
+    'fr-FR': fs.readFileSync('csl-locales/locales-fr-FR.xml', 'utf8'),
+    'French': fs.readFileSync('csl-locales/locales-fr-FR.xml', 'utf8')
+    };
+
+var style_file = conf.csl_path + conf.style + '.csl';
+var data_file = "";
+var input_file = "";
+var frags_file = "";
+
+for (var i = 0; i < process.argv.length; i++) {
+    switch(process.argv[i])
+    {
+        case "--data":
+            var data_file = process.argv[++i];
+            break;
+
+        case "--output":
+            var o = process.argv[++i];
+            if(o == 'html' || o == 'md') conf.output = o;
+            break;            
+
+        case "--style":
+            style_file = process.argv[++i];
+            break;
+
+        case "--items":
+            var items = JSON.parse(process.argv[++i]);
+            if(items instanceof Array)
+                conf.items = items;
+            break;
+
+        case "--locale":
+            var l = process.argv[++i];
+            if(_.contains(locales, l))
+                conf.locale = l;
+            break;
+
+        case "--no-sort":
+            config.sort = false;
+            break;
+
+        case "--input":
+            input_file = process.argv[++i];
+            break;
+
+        case "--fragments":
+            frags_file = process.argv[++i];
+            break;
+    }
+}
+
+var style = fs.readFileSync(style_file, 'utf8');
+var data = JSON.parse(fs.readFileSync(data_file, 'utf8'));
+var input = (input_file) ? fs.readFileSync(input_file, 'utf8') : "";
+
+if(!(data instanceof Object)) {
+    console.log("unxpected input data --- see refactorbib.js");
+    exit(0);
+}
+
+var sys = {
+    items: data,    
+    retrieveLocale: function(lang){
+        var ret = locales[lang];
+        return ret;
+    },
+    retrieveItem: function(id){
+        return this.items[id];
+    }
+};
+
+if(frags_file) {
+    fragments = JSON.parse(fs.readFileSync(frags_file, 'utf8'));
+} else {
+    fragments = [{token: "#bib", items: conf.items}];
+}
+
+var engine = new CSL.Engine(sys, style, conf.locale, conf.locale);
+
+var output = input;
+
+for(var i = 0; i < fragments.length; i++) {
+
+    var frag = fragments[i];
+
+    if(!(frag.items instanceof Array) && frag.items === 'all') {
+        frag.items = [];
+        _.each(data, function (val, key) {        
+            if(val) frag.items.push(key);
+        });
+    }
+
+    if(conf.sort)
+        frag.items.sort();
+    
+    engine.updateItems(frag.items, true);
+    var bib = engine.makeBibliography();
+
+    if(conf.output == "md") {
+        var md = tomarkdown(bib);
+        if(input) {
+            output = inject(output, frag.token, md);
+        } else {
+            output += md;
+        }
+        
+    } else if(conf.output == "html") {
+        var html = tohtml(bib);
+        if(input) {
+            output = inject(output, frag.token, html);
+        } else {
+            html = "<html>\n<head>\t<meta charset=\"utf-8\">\n</head>\n<body>" + html + "\n</body>";
+            output += html;
+        }
+    }     
+
+}
+
+// print results to stdout
+console.log(output);
+
+// helper functions
+
+function inject(data, token, input) {
+    return data.replace(token, input);
+}
+
+function tomarkdown(bib) {
+    var md = "";
+    _.each(bib[1], function (e) {
+        md += (">" + e);
+        md += "\n>\n";
+    });    
+    return md;
+}
+
+function tohtml(bib) {
+    var html = bib[0].bibstart + "\n";
+    _.each(bib[1], function (e) {
+        html += e + "\n";
+    });
+    html += bib[0].bibend + "\n";
+    return html;
+}
+
+

lib/csl_nodejs_jsdom.js

@@ -0,0 +1,705 @@
+/*
+ * Copyright (c) 2009 and 2010 Frank G. Bennett, Jr. All Rights
+ * Reserved.
+ *
+ * The contents of this file are subject to the Common Public
+ * Attribution License Version 1.0 (the “License”); you may not use
+ * this file except in compliance with the License. You may obtain a
+ * copy of the License at:
+ *
+ * http://bitbucket.org/fbennett/citeproc-js/src/tip/LICENSE.
+ *
+ * The License is based on the Mozilla Public License Version 1.1 but
+ * Sections 14 and 15 have been added to cover use of software over a
+ * computer network and provide for limited attribution for the
+ * Original Developer. In addition, Exhibit A has been modified to be
+ * consistent with Exhibit B.
+ *
+ * Software distributed under the License is distributed on an “AS IS”
+ * basis, WITHOUT WARRANTY OF ANY KIND, either express or implied. See
+ * the License for the specific language governing rights and limitations
+ * under the License.
+ *
+ * The Original Code is the citation formatting software known as
+ * "citeproc-js" (an implementation of the Citation Style Language
+ * [CSL]), including the original test fixtures and software located
+ * under the ./std subdirectory of the distribution archive.
+ *
+ * The Original Developer is not the Initial Developer and is
+ * __________. If left blank, the Original Developer is the Initial
+ * Developer.
+ *
+ * The Initial Developer of the Original Code is Frank G. Bennett,
+ * Jr. All portions of the code written by Frank G. Bennett, Jr. are
+ * Copyright (c) 2009 and 2010 Frank G. Bennett, Jr. All Rights Reserved.
+ *
+ * Alternatively, the contents of this file may be used under the
+ * terms of the GNU Affero General Public License (the [AGPLv3]
+ * License), in which case the provisions of [AGPLv3] License are
+ * applicable instead of those above. If you wish to allow use of your
+ * version of this file only under the terms of the [AGPLv3] License
+ * and not to allow others to use your version of this file under the
+ * CPAL, indicate your decision by deleting the provisions above and
+ * replace them with the notice and other provisions required by the
+ * [AGPLv3] License. If you do not delete the provisions above, a
+ * recipient may use your version of this file under either the CPAL
+ * or the [AGPLv3] License.”
+ */
+var zotero = {};
+zotero.Debug = function(s, level){
+    return;
+    console.log(s);
+}
+
+var Encoder = {
+
+    // When encoding do we convert characters into html or numerical entities
+    EncodeType : "entity",  // entity OR numerical
+
+    isEmpty : function(val){
+        if(val){
+            //replaced by fcheslack so whitespace separators are not stripped from CSL
+            //return ((val===null) || val.length==0 || /^\s+$/.test(val));
+            return ((val===null) || val.length==0);
+        }else{
+            return true;
+        }
+    },
+    // Convert HTML entities into numerical entities
+    HTML2Numerical : function(s){
+        var arr1 = new Array(' ','¡','¢','£','¤','¥','¦','§','¨','©','ª','«','¬','­','®','¯','°','±','²','³','´','µ','¶','·','¸','¹','º','»','¼','½','¾','¿','à','á','â','ã','Ä','å','æ','ç','è','é','ê','ë','ì','í','î','ï','ð','ñ','ò','ó','ô','õ','Ö','×','ø','ù','ú','û','Ü','ý','þ','ß','à','á','â','ã','ä','å','æ','ç','è','é','ê','ë','ì','í','î','ï','ð','ñ','ò','ó','ô','õ','ö','÷','Ø','ù','ú','û','ü','ý','þ','ÿ','"','&','<','>','œ','œ','š','š','ÿ','ˆ','˜',' ',' ',' ','‌','‍','‎','‏','–','—','‘','’','‚','“','”','„','†','†','‰','‹','›','€','ƒ','α','β','γ','δ','ε','ζ','η','θ','ι','κ','λ','μ','ν','ξ','ο','π','ρ','σ','τ','υ','φ','χ','ψ','ω','α','β','γ','δ','ε','ζ','η','θ','ι','κ','λ','μ','ν','ξ','ο','π','ρ','ς','σ','τ','υ','φ','χ','ψ','ω','ϑ','ϒ','ϖ','•','…','′','′','‾','⁄','℘','ℑ','ℜ','™','ℵ','←','↑','→','↓','↔','↵','←','↑','→','↓','↔','∀','∂','∃','∅','∇','∈','∉','∋','∏','∑','−','∗','√','∝','∞','∠','∧','∨','∩','∪','∫','∴','∼','≅','≈','≠','≡','≤','≥','⊂','⊃','⊄','⊆','⊇','⊕','⊗','⊥','⋅','⌈','⌉','⌊','⌋','⟨','⟩','◊','♠','♣','♥','♦');
+        var arr2 = new Array(' ','¡','¢','£','¤','¥','¦','§','¨','©','ª','«','¬','­','®','¯','°','±','²','³','´','µ','¶','·','¸','¹','º','»','¼','½','¾','¿','À','Á','Â','Ã','Ä','Å','Æ','Ç','È','É','Ê','Ë','Ì','Í','Î','Ï','Ð','Ñ','Ò','Ó','Ô','Õ','Ö','×','Ø','Ù','Ú','Û','Ü','Ý','Þ','ß','à','á','â','ã','ä','å','æ','ç','è','é','ê','ë','ì','í','î','ï','ð','ñ','ò','ó','ô','õ','ö','÷','ø','ù','ú','û','ü','ý','þ','ÿ','"','&','<','>','Œ','œ','Š','š','Ÿ','ˆ','˜',' ',' ',' ','‌','‍','‎','‏','–','—','‘','’','‚','“','”','„','†','‡','‰','‹','›','€','ƒ','Α','Β','Γ','Δ','Ε','Ζ','Η','Θ','Ι','Κ','Λ','Μ','Ν','Ξ','Ο','Π','Ρ','Σ','Τ','Υ','Φ','Χ','Ψ','Ω','α','β','γ','δ','ε','ζ','η','θ','ι','κ','λ','μ','ν','ξ','ο','π','ρ','ς','σ','τ','υ','φ','χ','ψ','ω','ϑ','ϒ','ϖ','•','…','′','″','‾','⁄','℘','ℑ','ℜ','™','ℵ','←','↑','→','↓','↔','↵','⇐','⇑','⇒','⇓','⇔','∀','∂','∃','∅','∇','∈','∉','∋','∏','∑','−','∗','√','∝','∞','∠','∧','∨','∩','∪','∫','∴','∼','≅','≈','≠','≡','≤','≥','⊂','⊃','⊄','⊆','⊇','⊕','⊗','⊥','⋅','⌈','⌉','⌊','⌋','〈','〉','◊','♠','♣','♥','♦');
+        return this.swapArrayVals(s,arr1,arr2);
+    },  
+
+    // Convert Numerical entities into HTML entities
+    NumericalToHTML : function(s){
+        var arr1 = new Array(' ','¡','¢','£','¤','¥','¦','§','¨','©','ª','«','¬','­','®','¯','°','±','²','³','´','µ','¶','·','¸','¹','º','»','¼','½','¾','¿','À','Á','Â','Ã','Ä','Å','Æ','Ç','È','É','Ê','Ë','Ì','Í','Î','Ï','Ð','Ñ','Ò','Ó','Ô','Õ','Ö','×','Ø','Ù','Ú','Û','Ü','Ý','Þ','ß','à','á','â','ã','ä','å','æ','ç','è','é','ê','ë','ì','í','î','ï','ð','ñ','ò','ó','ô','õ','ö','÷','ø','ù','ú','û','ü','ý','þ','ÿ','"','&','<','>','Œ','œ','Š','š','Ÿ','ˆ','˜',' ',' ',' ','‌','‍','‎','‏','–','—','‘','’','‚','“','”','„','†','‡','‰','‹','›','€','ƒ','Α','Β','Γ','Δ','Ε','Ζ','Η','Θ','Ι','Κ','Λ','Μ','Ν','Ξ','Ο','Π','Ρ','Σ','Τ','Υ','Φ','Χ','Ψ','Ω','α','β','γ','δ','ε','ζ','η','θ','ι','κ','λ','μ','ν','ξ','ο','π','ρ','ς','σ','τ','υ','φ','χ','ψ','ω','ϑ','ϒ','ϖ','•','…','′','″','‾','⁄','℘','ℑ','ℜ','™','ℵ','←','↑','→','↓','↔','↵','⇐','⇑','⇒','⇓','⇔','∀','∂','∃','∅','∇','∈','∉','∋','∏','∑','−','∗','√','∝','∞','∠','∧','∨','∩','∪','∫','∴','∼','≅','≈','≠','≡','≤','≥','⊂','⊃','⊄','⊆','⊇','⊕','⊗','⊥','⋅','⌈','⌉','⌊','⌋','〈','〉','◊','♠','♣','♥','♦');
+        var arr2 = new Array(' ','¡','¢','£','¤','¥','¦','§','¨','©','ª','«','¬','­','®','¯','°','±','²','³','´','µ','¶','·','¸','¹','º','»','¼','½','¾','¿','à','á','â','ã','Ä','å','æ','ç','è','é','ê','ë','ì','í','î','ï','ð','ñ','ò','ó','ô','õ','Ö','×','ø','ù','ú','û','Ü','ý','þ','ß','à','á','â','ã','ä','å','æ','ç','è','é','ê','ë','ì','í','î','ï','ð','ñ','ò','ó','ô','õ','ö','÷','Ø','ù','ú','û','ü','ý','þ','ÿ','"','&','<','>','œ','œ','š','š','ÿ','ˆ','˜',' ',' ',' ','‌','‍','‎','‏','–','—','‘','’','‚','“','”','„','†','†','‰','‹','›','€','ƒ','α','β','γ','δ','ε','ζ','η','θ','ι','κ','λ','μ','ν','ξ','ο','π','ρ','σ','τ','υ','φ','χ','ψ','ω','α','β','γ','δ','ε','ζ','η','θ','ι','κ','λ','μ','ν','ξ','ο','π','ρ','ς','σ','τ','υ','φ','χ','ψ','ω','ϑ','ϒ','ϖ','•','…','′','′','‾','⁄','℘','ℑ','ℜ','™','ℵ','←','↑','→','↓','↔','↵','←','↑','→','↓','↔','∀','∂','∃','∅','∇','∈','∉','∋','∏','∑','−','∗','√','∝','∞','∠','∧','∨','∩','∪','∫','∴','∼','≅','≈','≠','≡','≤','≥','⊂','⊃','⊄','⊆','⊇','⊕','⊗','⊥','⋅','⌈','⌉','⌊','⌋','⟨','⟩','◊','♠','♣','♥','♦');
+        return this.swapArrayVals(s,arr1,arr2);
+    },
+
+
+    // Numerically encodes all unicode characters
+    numEncode : function(s){
+        
+        if(this.isEmpty(s)) return "";
+
+        var e = "";
+        for (var i = 0; i < s.length; i++)
+        {
+            var c = s.charAt(i);
+            if (c < " " || c > "~")
+            {
+                c = "&#" + c.charCodeAt() + ";";
+            }
+            e += c;
+        }
+        return e;
+    },
+    
+    // HTML Decode numerical and HTML entities back to original values
+    htmlDecode : function(s){
+
+        var c,m,d = s;
+        
+        if(this.isEmpty(d)) return "";
+
+        // convert HTML entites back to numerical entites first
+        d = this.HTML2Numerical(d);
+        
+        // look for numerical entities &#34;
+        arr=d.match(/&#[0-9]{1,5};/g);
+        
+        // if no matches found in string then skip
+        if(arr!=null){
+            for(var x=0;x<arr.length;x++){
+                m = arr[x];
+                c = m.substring(2,m.length-1); //get numeric part which is refernce to unicode character
+                // if its a valid number we can decode
+                if(c >= -32768 && c <= 65535){
+                    // decode every single match within string
+                    d = d.replace(m, String.fromCharCode(c));
+                }else{
+                    d = d.replace(m, ""); //invalid so replace with nada
+                }
+            }           
+        }
+
+        return d;
+    },      
+
+    // encode an input string into either numerical or HTML entities
+    htmlEncode : function(s,dbl){
+            
+        if(this.isEmpty(s)) return "";
+
+        // do we allow double encoding? E.g will &amp; be turned into &amp;amp;
+        dbl = dbl || false; //default to prevent double encoding
+        
+        // if allowing double encoding we do ampersands first
+        if(dbl){
+            if(this.EncodeType=="numerical"){
+                s = s.replace(/&/g, "&#38;");
+            }else{
+                s = s.replace(/&/g, "&amp;");
+            }
+        }
+
+        // convert the xss chars to numerical entities ' " < >
+        s = this.XSSEncode(s,false);
+        
+        if(this.EncodeType=="numerical" || !dbl){
+            // Now call function that will convert any HTML entities to numerical codes
+            s = this.HTML2Numerical(s);
+        }
+
+        // Now encode all chars above 127 e.g unicode
+        s = this.numEncode(s);
+
+        // now we know anything that needs to be encoded has been converted to numerical entities we
+        // can encode any ampersands & that are not part of encoded entities
+        // to handle the fact that I need to do a negative check and handle multiple ampersands &&&
+        // I am going to use a placeholder
+
+        // if we don't want double encoded entities we ignore the & in existing entities
+        if(!dbl){
+            s = s.replace(/&#/g,"##AMPHASH##");
+        
+            if(this.EncodeType=="numerical"){
+                s = s.replace(/&/g, "&#38;");
+            }else{
+                s = s.replace(/&/g, "&amp;");
+            }
+
+            s = s.replace(/##AMPHASH##/g,"&#");
+        }
+        
+        // replace any malformed entities
+        s = s.replace(/&#\d*([^\d;]|$)/g, "$1");
+
+        if(!dbl){
+            // safety check to correct any double encoded &amp;
+            s = this.correctEncoding(s);
+        }
+
+        // now do we need to convert our numerical encoded string into entities
+        if(this.EncodeType=="entity"){
+            s = this.NumericalToHTML(s);
+        }
+
+        return s;                   
+    },
+
+    // Encodes the basic 4 characters used to malform HTML in XSS hacks
+    XSSEncode : function(s,en){
+        if(!this.isEmpty(s)){
+            en = en || true;
+            // do we convert to numerical or html entity?
+            if(en){
+                s = s.replace(/\'/g,"&#39;"); //no HTML equivalent as &apos is not cross browser supported
+                s = s.replace(/\"/g,"&quot;");
+                s = s.replace(/</g,"&lt;");
+                s = s.replace(/>/g,"&gt;");
+            }else{
+                s = s.replace(/\'/g,"&#39;"); //no HTML equivalent as &apos is not cross browser supported
+                s = s.replace(/\"/g,"&#34;");
+                s = s.replace(/</g,"&#60;");
+                s = s.replace(/>/g,"&#62;");
+            }
+            return s;
+        }else{
+            return "";
+        }
+    },
+
+    // returns true if a string contains html or numerical encoded entities
+    hasEncoded : function(s){
+        if(/&#[0-9]{1,5};/g.test(s)){
+            return true;
+        }else if(/&[A-Z]{2,6};/gi.test(s)){
+            return true;
+        }else{
+            return false;
+        }
+    },
+
+    // will remove any unicode characters
+    stripUnicode : function(s){
+        return s.replace(/[^\x20-\x7E]/g,"");
+        
+    },
+
+    // corrects any double encoded &amp; entities e.g &amp;amp;
+    correctEncoding : function(s){
+        return s.replace(/(&amp;)(amp;)+/,"$1");
+    },
+
+
+    // Function to loop through an array swaping each item with the value from another array e.g swap HTML entities with Numericals
+    swapArrayVals : function(s,arr1,arr2){
+        if(this.isEmpty(s)) return "";
+        var re;
+        if(arr1 && arr2){
+            //ShowDebug("in swapArrayVals arr1.length = " + arr1.length + " arr2.length = " + arr2.length)
+            // array lengths must match
+            if(arr1.length == arr2.length){
+                for(var x=0,i=arr1.length;x<i;x++){
+                    re = new RegExp(arr1[x], 'g');
+                    s = s.replace(re,arr2[x]); //swap arr1 item with matching item from arr2    
+                }
+            }
+        }
+        return s;
+    },
+
+    inArray : function( item, arr ) {
+        for ( var i = 0, x = arr.length; i < x; i++ ){
+            if ( arr[i] === item ){
+                return i;
+            }
+        }
+        return -1;
+    }
+
+};
+
+var DOMParser;
+var CSL_NODEJS_JSDOM = function () {
+        DOMParser = function() {};
+        DOMParser.prototype.parseFromString = function(str, contentType) {
+            var jsdom = require("jsdom").jsdom;
+            return jsdom(str);
+            /*
+            if ("undefined" != typeof ActiveXObject) {
+                var xmldata = new ActiveXObject('MSXML.DomDocument');
+                xmldata.async = false;
+                xmldata.loadXML(str);
+                return xmldata;
+            } else if ("undefined" != typeof XMLHttpRequest) {
+                var xmldata = new XMLHttpRequest;
+                if (!contentType) {
+                    contentType = 'text/xml';
+                }
+                xmldata.open('GET', 'data:' + contentType + ';charset=utf-8,' + encodeURIComponent(str), false);
+                if(xmldata.overrideMimeType) {
+                    xmldata.overrideMimeType(contentType);
+                }
+                xmldata.send(null);
+                return xmldata.responseXML;
+            }
+            */
+        };
+        /*
+        this.hasAttributes = function (node) {
+            var ret;
+            if (node.attributes && node.attributes.length) {
+                ret = true;
+            } else {
+                ret = false;
+            }
+            return ret;
+        };
+        */
+    this.hasAttributes = function (node) {
+        zotero.Debug('CSL_NODEJS.hasAttributes', 3);
+        zotero.Debug("node.hasAttributes(): " + node.hasAttributes(), 3);
+        //zotero.Debug(node);
+        return node.hasAttributes();
+    };
+    this.importNode = function (doc, srcElement) {
+        zotero.Debug('CSL_NODEJS.importNode', 3);
+        if ("undefined" == typeof doc.importNode) {
+            var ret = this._importNode(doc, srcElement, true);
+        } else {
+            var ret = doc.importNode(srcElement, true);
+        }
+        return ret;
+    };
+    this._importNode = function(doc, node, allChildren) {
+        zotero.Debug('CSL_NODEJS._importNode', 3);
+        switch (node.nodeType) {
+            case 1:
+                var newNode = doc.createElement(node.nodeName);
+                if (node.attributes && node.attributes.length > 0)
+                    for (var i = 0, il = node.attributes.length; i < il;)
+                        newNode.setAttribute(node.attributes[i].nodeName, node.getAttribute(node.attributes[i++].nodeName));
+                    if (allChildren && node.childNodes && node.childNodes.length > 0)
+                        for (var i = 0, il = node.childNodes.length; i < il;)
+                            newNode.appendChild(this._importNode(doc, node.childNodes[i++], allChildren));
+                return newNode;
+                break;
+            case 3:
+            case 4:
+            case 8:
+        }
+    };
+    this.parser = new DOMParser();
+    // This seems horribly tormented, but there might be a reason for it.
+    // Perhaps this was the only way I found to get namespacing to work ... ?
+    var str = "<docco><institution institution-parts=\"long\" delimiter=\", \" substitute-use-first=\"1\" use-last=\"1\"><institution-part name=\"long\"></institution></docco>";
+    var inst_doc = this.parser.parseFromString(str, "text/xml");
+    var inst_node = inst_doc.getElementsByTagName("institution");
+    this.institution = inst_node.item(0);
+    var inst_part_node = inst_doc.getElementsByTagName("institution-part");
+    this.institutionpart = inst_part_node.item(0);
+    this.ns = "http://purl.org/net/xbiblio/csl";
+};
+CSL_NODEJS_JSDOM.prototype.clean = function (xml) {
+    zotero.Debug('CSL_NODEJS.clean', 3);
+    xml = xml.replace(/<\?[^?]+\?>/g, "");
+    xml = xml.replace(/<![^>]+>/g, "");
+    xml = xml.replace(/^\s+/, "");
+    xml = xml.replace(/\s+$/, "");
+    xml = xml.replace(/^\n*/, "");
+    return xml;
+};
+CSL_NODEJS_JSDOM.prototype.getStyleId = function (myxml) {
+    var text = "";
+    var node = myxml.getElementsByTagName("id");
+    if (node && node.length) {
+        node = node.item(0);
+    }
+    if (node) {
+        // W3C conformant browsers
+        text = node.textContent;
+    }
+    return text;
+};
+
+CSL_NODEJS_JSDOM.prototype.children = function (myxml) {
+    zotero.Debug("children called on: " + myxml, 3);
+    var children, pos, len, ret;
+    if (myxml) {
+        ret = [];
+        children = myxml.childNodes;
+        for (pos = 0, len = children.length; pos < len; pos += 1) {
+            if (children[pos].nodeName != "#text") {
+                ret.push(children[pos]);
+            }
+        }
+        return ret;
+    } else {
+        return [];
+    }
+};
+CSL_NODEJS_JSDOM.prototype.nodename = function (myxml) {
+    zotero.Debug('CSL_NODEJS.nodename ' + myxml, 3);
+    //zotero.Debug(myxml);
+    var ret = myxml.nodeName;
+    if(ret) ret = ret.toLowerCase();
+    zotero.Debug("node name = " + ret, 3);
+    return ret;
+};
+CSL_NODEJS_JSDOM.prototype.attributes = function (myxml) {
+    zotero.Debug('CSL_NODEJS.attributes');
+    var ret, attrs, attr, key, xml, pos, len;
+    ret = new Object();
+    if (myxml && this.hasAttributes(myxml)) {
+        attrs = myxml.attributes;
+        for (pos = 0, len=attrs.length; pos < len; pos += 1) {
+            attr = attrs[pos];
+            var v = attr.value;
+            //v = v.replace('&lt;', '&60;').replace('&gt;', '&62').replace('&quot;', '&34').replace('&amp;', '&38;');
+            v = Encoder.htmlDecode(v);
+            ret["@" + attr.name] = v;
+        }
+    }
+    return ret;
+};
+CSL_NODEJS_JSDOM.prototype.content = function (myxml) {
+    zotero.Debug('CSL_NODEJS.content', 3);
+    var ret;
+    if ("undefined" != typeof myxml.textContent) {
+        ret = myxml.textContent;
+    } else if ("undefined" != typeof myxml.innerText) {
+        ret = myxml.innerText;
+    } else {
+        ret = myxml.txt;
+    }
+    return ret;
+};
+CSL_NODEJS_JSDOM.prototype.namespace = {
+    "xml":"http://www.w3.org/XML/1998/namespace"
+}
+CSL_NODEJS_JSDOM.prototype.numberofnodes = function (myxml) {
+    zotero.Debug('CSL_NODEJS.numberofnodes', 3);
+    if (myxml) {
+        zotero.Debug(myxml.length);
+        return myxml.length;
+    } else {
+        zotero.Debug('0');
+        return 0;
+    }
+};
+CSL_NODEJS_JSDOM.prototype.getAttributeName = function (attr) {
+    zotero.Debug('CSL_NODEJS.getAttributeName', 3);
+    var ret = attr.name;
+    return ret;
+}
+CSL_NODEJS_JSDOM.prototype.getAttributeValue = function (myxml,name,namespace) {
+    zotero.Debug('CSL_NODEJS.getAttributeValue', 3);
+    var ret = "";
+    if (myxml && this.hasAttributes(myxml) && myxml.getAttribute(name)) {
+        ret = myxml.getAttribute(name);
+    }
+    return ret;
+}
+CSL_NODEJS_JSDOM.prototype.getNodeValue = function (myxml,name) {
+    zotero.Debug('CSL_NODEJS.getNodeValue : ' + name, 3);
+    var ret = "";
+    if (name){
+        var vals = myxml.getElementsByTagName(name);
+        if (vals.length > 0) {
+            if ("undefined" != typeof vals[0].textContent) {
+                ret = vals[0].textContent;
+            } else if ("undefined" != typeof vals[0].innerText) {
+                ret = vals[0].innerText;
+            } else {
+                ret = vals[0].text;
+            }
+        }
+    } else {
+        ret = myxml;
+    }
+    if (ret && ret.childNodes && (ret.childNodes.length == 0 || (ret.childNodes.length == 1 && ret.firstChild.nodeName == "#text"))) {
+        if ("undefined" != typeof ret.textContent) {
+            ret = ret.textContent;
+        } else if ("undefined" != typeof ret.innerText) {
+            ret = ret.innerText;
+        } else {
+            ret = ret.text;
+        }
+    }
+    return ret;
+}
+CSL_NODEJS_JSDOM.prototype.setAttributeOnNodeIdentifiedByNameAttribute = function (myxml,nodename,partname,attrname,val) {
+    zotero.Debug('CSL_NODEJS.setAttributeOnNodeIdentifiedByNameAttribute', 3);
+    var pos, len, xml, nodes, node;
+    if (attrname.slice(0,1) === '@'){
+        attrname = attrname.slice(1);
+    }
+    nodes = myxml.getElementsByTagName(nodename);
+    for (pos = 0, len = nodes.length; pos < len; pos += 1) {
+        node = nodes[pos];
+        if (node.getAttribute("name") != partname) {
+            continue;
+        }
+        node.setAttribute(attrname, val);
+    }
+}
+CSL_NODEJS_JSDOM.prototype.deleteNodeByNameAttribute = function (myxml,val) {
+    zotero.Debug('CSL_NODEJS.deleteNodeByNameAttribute', 3);
+    var pos, len, node, nodes;
+    nodes = myxml.childNodes;
+    for (pos = 0, len = nodes.length; pos < len; pos += 1) {
+        node = nodes[pos];
+        if (!node || node.nodeType == node.TEXT_NODE) {
+            continue;
+        }
+        if (this.hasAttributes(node) && node.getAttribute("name") == val) {
+            myxml.removeChild(nodes[pos]);
+        }
+    }
+}
+CSL_NODEJS_JSDOM.prototype.deleteAttribute = function (myxml,attr) {
+    zotero.Debug('CSL_NODEJS.deleteAttribute', 3);
+    myxml.removeAttribute(attr);
+}
+CSL_NODEJS_JSDOM.prototype.setAttribute = function (myxml,attr,val) {
+    zotero.Debug('CSL_NODEJS.setAttribute', 3);
+    var attribute;
+    if (!myxml.ownerDocument) {
+        myxml = myxml.firstChild;
+    }
+    attribute = myxml.ownerDocument.createAttribute(attr);
+    zotero.Debug('created attribute:');
+    //zotero.Debug(attribute);
+    myxml.setAttribute(attr, val);
+    return false;
+}
+CSL_NODEJS_JSDOM.prototype.nodeCopy = function (myxml) {
+    zotero.Debug('CSL_NODEJS.nodeCopy', 3);
+    var cloned_node = myxml.cloneNode(true);
+    return cloned_node;
+}
+CSL_NODEJS_JSDOM.prototype.getNodesByName = function (myxml,name,nameattrval) {
+    zotero.Debug('CSL_NODEJS.getNodesByName : ' + name + " = " + nameattrval, 3);
+    var ret, nodes, node, pos, len;
+    ret = [];
+    if(typeof myxml.getElementsByTagName == 'undefined'){
+        return ret;
+    }
+    nodes = myxml.getElementsByTagName(name);
+    for (pos = 0, len = nodes.length; pos < len; pos += 1) {
+        node = nodes.item(pos);
+        if (nameattrval && !(this.hasAttributes(node) && node.getAttribute("name") == nameattrval)) {
+            continue;
+        }
+        ret.push(node);
+    }
+    return ret;
+}
+CSL_NODEJS_JSDOM.prototype.nodeNameIs = function (myxml,name) {
+    zotero.Debug('CSL_NODEJS.nodeNameIs', 3);
+    if (name == myxml.nodeName.toLowerCase()) {
+        return true;
+    }
+    return false;
+}
+CSL_NODEJS_JSDOM.prototype.makeXml = function (myxml) {
+    zotero.Debug('CSL_NODEJS.makeXml', 3);
+    var ret, topnode;
+    if (!myxml) {
+        myxml = "<docco><bogus/></docco>";
+    }
+    myxml = myxml.replace(/\s*<\?[^>]*\?>\s*\n*/g, "");
+    myxml = myxml.replace(/<style\s/, "<cslstyle ").replace("</style", "</cslstyle");
+    myxml = myxml.trim();
+    //console.log(myxml);
+    //process.exit();
+    //console.error(myxml);
+    //process.exit();
+    var doc = this.parser.parseFromString(myxml, "application/xml");
+    //console.log("doc : " + doc.nodeName + " : " + doc.nodeValue);
+    //console.log(doc);
+    var firstChild = doc.firstChild;
+    //console.log("firstChild : " + firstChild.nodeName + " : " + firstChild.nodeValue);
+    var cslstylenodes = doc.getElementsByTagName('cslstyle');
+    var snode = cslstylenodes.item(0);
+    //zotero.Debug("snode : " + snode.nodeName + " : " + snode.nodeValue);
+    
+    if(snode){
+        return snode;
+    }
+    else{
+        return firstChild;
+    }
+};
+CSL_NODEJS_JSDOM.prototype.insertChildNodeAfter = function (parent,node,pos,datexml) {
+    zotero.Debug('CSL_NODEJS.insertChildNodeAfter', 3);
+    var myxml, xml;
+    myxml = this.importNode(node.ownerDocument, datexml);
+    parent.replaceChild(myxml, node);
+    return parent;
+ };
+CSL_NODEJS_JSDOM.prototype.insertPublisherAndPlace = function(myxml) {
+    zotero.Debug('CSL_NODEJS.insertPublisherAndPlace', 5);
+    var group = myxml.getElementsByTagName("group");
+    for (var i = 0, ilen = group.length; i < ilen; i += 1) {
+        var node = group.item(i);
+        if (node.childNodes.length === 2) {
+            var twovars = [];
+            for (var j = 0, jlen = 2; j < jlen; j += 1) {
+                var child = node.childNodes.item(j);
+                if (child.childNodes.length === 0) {
+                    twovars.push(child.getAttribute('variable'));
+                    if (child.getAttribute('suffix')
+                        || child.getAttribute('prefix')) {
+                        twovars = [];
+                        break;
+                    }
+                }
+            }
+            if (twovars.indexOf("publisher") > -1 && twovars.indexOf("publisher-place") > -1) {
+                node.setAttribute('has-publisher-and-publisher-place', true);
+            }
+        }
+    }
+};
+CSL_NODEJS_JSDOM.prototype.addMissingNameNodes = function(myxml) {
+
+    var nameslist = myxml.getElementsByTagName("names");
+    for (var i = 0, ilen = nameslist.length; i < ilen; i += 1) {
+        var names = nameslist.item(i);
+        var namelist = names.getElementsByTagName("name");
+        if ((!namelist || namelist.length === 0)
+            && names.parentNode.tagName.toLowerCase() !== "substitute") {
+        
+            var doc = names.ownerDocument;
+            var name = doc.createElement("name");
+            names.appendChild(name);
+        }
+    };
+};
+
+CSL_NODEJS_JSDOM.prototype.addInstitutionNodes = function(myxml) {
+    zotero.Debug('CSL_NODEJS.addInstitutionNodes');
+    //zotero.Debug("myxml : " + myxml.nodeName + " : " + myxml.nodeValue);
+    /*
+    var names, thenames, institution, theinstitution, name, thename, xml, pos, len;
+    names = myxml.getElementsByTagName("names");
+    for (pos = 0, len = names.length; pos < len; pos += 1) {
+        thenames = names.item(pos);
+        name = thenames.getElementsByTagName("name");
+        if (name.length == 0) {
+            continue;
+        }
+        institution = thenames.getElementsByTagName("institution");
+        if (institution.length == 0) {
+            theinstitution = this.importNode(myxml.ownerDocument, this.institution);
+            theinstitutionpart = theinstitution.getElementsByTagName("institution-part").item(0);
+            thename = name.item(0);
+            thenames.insertBefore(theinstitution, thename.nextSibling);
+        }
+    }
+    */
+    var names, thenames, institution, theinstitution, name, thename, xml, pos, len;
+    var CSL_INSTITUTION_KEYS = [
+        "font-style",
+        "font-variant",
+        "font-weight",
+        "text-decoration",
+        "text-case"
+    ];
+    names = myxml.getElementsByTagName("names");
+    for (pos = 0, len = names.length; pos < len; pos += 1) {
+        thenames = names.item(pos);
+        name = thenames.getElementsByTagName("name");
+        if (name.length == 0) {
+            continue;
+        }
+        institution = thenames.getElementsByTagName("institution");
+        if (institution.length == 0) {
+            theinstitution = this.importNode(myxml.ownerDocument, this.institution);
+            theinstitutionpart = theinstitution.getElementsByTagName("institution-part").item(0);
+            thename = name.item(0);
+            thenames.insertBefore(theinstitution, thename.nextSibling);
+            for (var j = 0, jlen = CSL_INSTITUTION_KEYS.length; j < jlen; j += 1) {
+                var attrname = CSL_INSTITUTION_KEYS[j];
+                var attrval = thename.getAttribute(attrname);
+                if (attrval) {
+                    theinstitutionpart.setAttribute(attrname, attrval);
+                }
+            }
+            var nameparts = thename.getElementsByTagName("name-part");
+            for (var j = 0, jlen = nameparts.length; j < jlen; j += 1) {
+                if ('family' === nameparts[j].getAttribute('name')) {
+                    for (var k = 0, klen = CSL_INSTITUTION_KEYS.length; k < klen; k += 1) {
+                        var attrname = CSL_INSTITUTION_KEYS[k];
+                        var attrval = nameparts[j].getAttribute(attrname);
+                        if (attrval) {
+                            theinstitutionpart.setAttribute(attrname, attrval);
+                        }
+                    }
+                }
+            }
+        }
+    }
+    zotero.Debug("done with addInstitutionNodes");
+};
+
+CSL_NODEJS_JSDOM.prototype.flagDateMacros = function(myxml) {
+    var pos, len, thenode, thedate;
+    nodes = myxml.getElementsByTagName("macro");
+    for (pos = 0, len = nodes.length; pos < len; pos += 1) {
+        thenode = nodes.item(pos);
+        thedate = thenode.getElementsByTagName("date");
+        if (thedate.length) {
+            thenode.setAttribute('macro-has-date', 'true');
+        }
+    }
+};
+
+
+exports.CSL_NODEJS_JSDOM = CSL_NODEJS_JSDOM;

refactorbib.js

@@ -0,0 +1,111 @@
+/*
+ MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM$$ZZZZZZ$$$ZZ$$$ZMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
+ MMMMMMMMMMMMMMMMMMMMMMMMMM$$$$ZZ$$$$$$$$$$Z$$$$$$$$$$ZMMMMMMMMMMMMMMMMMMMMMMMMMM
+ MMMMMMMMMMMMMMMMMMMMMMZZOZZ$$$$Z$$Z$ZZ$Z$Z$$$$$$$7$$$$$$$MMMMMMMMMMMMMMMMMMMMMMM
+ MMMMMMMMMMMMMMMMMMMZOZ$Z$$ZZ$Z$Z$$Z$$$$$$$Z$$$$$$77$$7$$$$77MMMMMMMMMMMMMMMMMMMM
+ MMMMMMMMMMMMMMMMM$$$$$$Z$$ZZZZZZZ$Z7$$$Z$$$$$$$$$$$7$7$7777777OMMMMMMMMMMMMMMMMM
+ MMMMMMMMMMMMMMMO$$$$$$$$$Z$$$Z$Z$$$$$Z$$Z$$$$77$77$$77777777I7778MMMMMMMMMMMMMMM
+ MMMMMMMMMMMMM$$$$7$$$$$$ZZ$$Z7$$Z$$$$$$$$$$$7$77$$7777777777I7II7INMMMMMMMMMMMMM
+ MMMMMMMMMMMZ$$$7$7$7$$$$Z$$$Z$ZZZ$$$7$ZZ77777$$7$$$7777IIII7IIII????MMMMMMMMMMMM
+ MMMMMMMMMM7$$$77$$$$77$$$$$$Z$$$$$7777IIIII$7$Z7777$$77I$7II??+???+++MMMMMMMMMMM
+ MMMMMMMM877$777$$$$$7$$$Z$$$$$$$$?II?I?I?II???7$ZZ$$7777I7I????++??+++=MMMMMMMMM
+ MMMMMMMO$7$$$7$$$$$$$7$ZZZ$$$$$I7I+I?I?I?I$II$7$ZZ$O7$II7III?I??+?+?++++MMMMMMMM
+ MMMMMM$$77$7$$$$$$$7$$$Z$ZZ$$$7=====+=++++++??I?ZO$OZ$77III?I++?+++++==+~MMMMMMM
+ MMMMMZ7777$$$$Z$$$7$ZZZZ$ZZ$Z$+======+++++++??I?IZZZ8O7I7I????++??++++==++MMMMMM
+ MMMM87777$7$$$$$$Z7$ZZZZZ$ZZZI======+=++?????IIII$DO8D$7?I??+++++++++++++++MMMMM
+ MMMM7$7$7777$$$$$ZZ$$ZZ$Z$ZZ$+==++++++++?I?II7?77Z88D8OI????++?+??+++++++++7MMMM
+ MMM77$7$$77$$$$$Z$ZZZZOZZZZZZ+?777~=+==$7$77$777$ZOOOND77II?+???+++?++++++++MMMM
+ MM8?7$77777$$$$$ZZZ$ZZOZZZZZO=7+?$$77+I7?7888Z$ZZZO8DDD$II?????+?++++?+++++++MMM
+ MMI77$7$$7$$$$$ZZZZOZOOZZOOZO+7ZDZZ8I7O8O8OODOOZZ888NNZII??????+?++?++++?++++NMM
+ M$II$$$$$$$$Z$ZZZZZZZOZZOOZOZI7I77$I+IZO8OZOO$$ZO88NZ8DZ7?I???+???+++++++++++~MM
+ MII777$7$$Z$Z$ZZZ$ZZZZZZOOZZZ++++???=IZZ$7$$77$ZO8DNN8DD7I????????????+?+?+++=MM
+ M?I777$$$$$ZZZZZ$ZZOOOOZOOZZO???I$+77$Z$Z77$7$ZOOD8ODO8I7I?III?++??+?=++?+++++~M
+ Z?III$$77$$$$$$ZZZZZZZZOZOOOZ+?I7$7DDNDM$$$$$ZZ8888DZ8$7II??I?I+????+?+??+++?==M
+ ?????77$$$$$$Z$$Z$ZZZZO88OOOO7I7$ZZ7NNN88Z$OZOODD8D8D7$77??I?I???????????+++++=M
+ II?I?77$$$$Z$$Z$Z$ZZZOOOOZO8OZI$$O8NMNNNMN8O88DNONZ7$$7III?II?I?????++??++?++++M
+ ????I77$$$$$Z$ZZZOZZOOO8O8OODO7Z8NDZZ8MNN8N88DDNND$$77777III?????I?????+?+?++++M
+ IIIII777$ZZ$Z$ZZZZZZOOO8OOOO8O8ONDZDN8DNMNNNNNNND8$$77$I7I7IIIIIII??I?????+?+++N
+ II7I777Z$$$$$$$$$ZZZOOO8OOOOD8Z$Z$OO88DNNDMNDNNNDON7$77$7IIIIIIII??????+????+++N
+ III777$$$$$$Z$$$ZZZZZO8888O8DOZ7ZIZDO8N8DDDNNND887NN$$77777IIIII?????+???++++++M
+ ?II7I77$$Z$$$$$$$ZOZZO88O88ODO7III8ZON8DDMDNDD8N7IZDND87777IIIII?I?????????+?+?M
+ $7I77$7$$Z$$$$Z$$ZZ$OOZOZOO88Z$?I$ZZ8DDOONNND877II7DNNDDDD$IIII???????????+??+=M
+ N777$$$$$$$$$$$$Z$ZZOOOOZ$ZO8ZZ$7$OODDNNDNDDD$7I?IDDNDDNDDDDD$I?+?????????????+M
+ M777$7$$ZZZZZZ$$Z$ZZ$7ZZOOOOOOZO8+OZO8NDDDDZ$7I??78NNDNDNNDDD888Z????????????+MM
+ M$$$$$7Z$ZZZZZ$$$7$$ZZZOOOODO8OODO+=$$O8OOZ$77??+DDDNNDDDNNDDDD88DDO??????+???MM
+ MM7$7$Z$$$Z$ZZ$7OZOZO8O88Z8OOZ88NO8ODMDNDDMNN8I?8DDNDDDDDNDD8DD8D888OOOI????+DMM
+ MM$7$$$$$$$Z$Z$ODOZODD88O88OODODND8DNMDDMNDDDD+DDDDDDD88DDNDDDDD8DDD8888Z??+=MMM
+ MMM7$$$$$Z$ZZZZOD888D8O88DD8ND88ND88NN?I7$$O$I$DDDDDD8NNDDDDDDD8DD888888O??+MMMM
+ MMMM$$Z$ZZ$ZZZ888OD8DD88ODDZDD8D8NDO7?++++$?+?8D8DNDDD8NNDDDDDD88DD888888Z+OMMMM
+ MMMMO$$OZ$OZZOO8888888OZO8Z8DD8O8NDOO+++++++=8DDDDDDD8DDDDD8DDD888888888OO+MMMMM
+ MMMMM$$ZZZOZ$Z8888O88OZZO88O8888DDD8OZ++=+++88DNNDDDDDDDNDDD8D8DDD888888OOMMMMMM
+ MMMMMMZZZZZ$O8O88DO88ZZOOO888O88DDD8OO++==~OO8DNNDD8DDDDND88DDD88888888O8MMMMMMM
+ MMMMMMMOZZZ$OO88DD88ZO7ODO888888D8DD8OO$==888DDDDDZDDDNDDD8DD88DD888888OMMMMMMMM
+ MMMMMMMM$Z$O8888D888ZZ$88O888OO8DDDDOO88=O8O8DN8D8O8DDD8D888D8DD8888O8OMMMMMMMMM
+ MMMMMMMMMMZO8OO8888OZ$OO88D88OO8D8D8D88888DODDDD8D8NDDDDD8D8D8DDDDO8O8MMMMMMMMMM
+ MMMMMMMMMMMO8O8O8D8OZ$O8888DDDO888DN888888888DD88DD8D8DDD8D88888D888MMMMMMMMMMMM
+ MMMMMMMMMMMMMOO888OZ$ZO88DDDDN8888D8NDD8DDODDD8DDDDDDDD88DD888D88ZOMMMMMMMMMMMMM
+ MMMMMMMMMMMMMMD888ZZ$OO888DDDNDN8D8DDDDDM88888NNDDDDDD8D8888D8D88MMMMMMMMMMMMMMM
+ MMMMMMMMMMMMMMMMOOZZZO88888DDDDDDDD8DDDD888DNNNDDD888D8D88888DOMMMMMMMMMMMMMMMMM
+ MMMMMMMMMMMMMMMMMMMOO8888D88D8D8D8DDDDDDDNDNDDDDD888888O8888NMMMMMMMMMMMMMMMMMMM
+ MMMMMMMMMMMMMMMMMMMMMMO88888DDD8DDDDDD88DDDNDDDD888888D88OMMMMMMMMMMMMMMMMMMMMMM
+ MMMMMMMMMMMMMMMMMMMMMMMMM88888O88D8DDD8D8DDDDD8D888OZOMMMMMMMMMMMMMMMMMMMMMMMMMM
+ MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMO888888D888DD888OOONMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
+ MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
+ author: gauthiier.info
+ */
+
+ var fs = require('fs');
+ var _ = require('underscore')._;
+
+var data_file = "";
+var index = false;
+
+for (var i = 0; i < process.argv.length; i++) {
+    switch(process.argv[i])
+    {
+        case "--data":
+            var data_file = process.argv[++i];
+            break;
+        case "--index":
+            index = true;
+            break;            
+	}
+}
+
+ var alldata = JSON.parse(fs.readFileSync(data_file, 'utf8'));
+
+ var data = {};
+ var items = [];
+
+//this is stupid (re: citeproc-js Item.id)
+for (var i = 0; i < alldata.length; i++) {
+    var d = alldata[i];
+    var id = alldata[i].id.toString();
+    if(d.author) {
+        id = d.author[0].family + d.issued['date-parts'][0][0].toString().replace(/,/g, '-');
+    } else if(d.editor) {
+        id = d.editor[0].family + d.issued['date-parts'][0][0].toString().replace(/,/g, '-');
+    }
+
+    // if identifier already exists (ex: Deleuze2011)
+    if(id in data) {
+    	for(var j = 97; j < 122; j++) { //append char at the end of indentifier (ex: Deleuze2011a)
+    		id = id + String.fromCharCode(j);
+    		if(!(id in data)) break;
+    	}
+    }
+
+    if(index)
+    	items.push(id.toString() + " - " + d.title); //sort?
+    alldata[i].id = id;
+    data[id] = alldata[i];
+}
+
+if(index) {	
+    items.sort();
+    console.log(JSON.stringify(items, null, 2));
+}
+
+if(!index)
+	console.log(JSON.stringify(data, null, 2));
+