commit 88f6b286c390f3a3beaa7c1d65e77ecb16a5796c
Author: gauthiier <d@gauthiier.info>
Date:   Mon Aug 18 18:38:12 2014 +0200

    haha! commit

diff --git a/.gitignore b/.gitignore
new file mode 100644
index 0000000..6bc6ad5
--- /dev/null
+++ b/.gitignore
@@ -0,0 +1,2 @@
+CONFIG
+*.pyc
\ No newline at end of file
diff --git a/README b/README
new file mode 100644
index 0000000..f387c78
--- /dev/null
+++ b/README
@@ -0,0 +1,39 @@
+777$7II7III??+,.......:+~=7$$Z$?$OOZOZ77?$$I+??I$ZOD8DD8DD888O$7$77$Z$$$ZZZZZOOO
+$$$777$$77II??~.,..,.=?777$ZZ==$OZZ$I?=+?Z+==~=7Z7Z$OO8888DDDD8ZOZ$$$7Z$ZOZ$ZZOO
+$$$7ZZ$Z$$77II=~:.,.:??+IZZZ+?O$ZI+?+:~+7I~~,:~?Z$88O88D88DDDDD8OZOZ$$$ZZZZZOOZZ
+$$$$ZZ$$$$777I??:::,:7ZZ8OZ$$$7?=::,:~??~:,.....7$8$IZDDD8DDDNDDOZZO$$ZZZZZOZOOO
+$$$77$7$7III$II+==+$$$OOO8OZ?=:......~. ........,?ZOI$88DOD8DDN8D888$7$ZZ$$Z$$ZO
+$$7$$$77I77$ZZ$7,:Z$OZOOOOOI.  ...,~:.....:~~+:===$Z$7OOD8DDD88O8D888O$7$Z$$$$OZ
+$$77$$77I$$ZOZI,.7Z88O88O8?. .,:~~::,,.,,,+?$ZZZZZ8OZZ$8$8NDDDD88ODO8ZZ$$$OZZZOO
+Z$Z$$$77$Z$$O$~.~?$ZOOOOOZ, ,?7$7II+:..,~+$III777I77I$O8OD8DD8D8DO8D88$77$$$ZZZZ
+OOOOZc$ZOZOZZ?..+??IZO8NO$I?===+=~~~,...,~II???+~:+~:+ZO8D88DOODDDDD8D88OZ77$ZZZ
+ZOZOOZZZZZOZ$II.~?I$ZZO8ZO~. ..~?+~~..  .,?$I$ZO888O?~$Z88D888O8888DONDD88Z7777$
+OZZ8O8OZZOZZZZ7I7I$ZZ7$OZ7:.=7ZDO7?~..   ,::+O7$O8O78O7IOD88N8D8DD88DD8OOOO7$$7Z
+OOOZ88888OOOOZZI~?I$Z$OZI+?77,?$I?:..   .,:,,~,,~+++~+I$ZZ8DDD8DNDD8DDOOOZ7?$$7$
+OOOZO88OO8OZ7=:,.?7IZZOZI,~=~. ... .    ..,,.. ...=:..~I$Z8DDDD8D8DDOD88a7II777$
+$OOOOOOO8O+.,.:++:++$ZOO7 .,.           .,,,....  ..:~.:$Z8DD8DDD88DDD8O$?????I7
+OO8O8O8OZ$.,:?=..::?IZZ8Z ..            ..,.,=,..  ..:I??7O8DD88D888D8OOI?II77II
+OOOO8OZZ7=,~7?~,,,~~?$7OZ,.          .,:~=:,.,:,  ..:=+:~788DDD88Z888OZ$+I?III$7
+ZOZZO$$$ZZZZ$I:~:~,,7=77$~:..     .:$$==IOO7=,.,....,:,:=+$D8DD8888D887II?7777$$
+ZOOZZZ$$ZZZZ7+::=:::::II~.:..     ..=+?+IIII:...,,..,,,:==$DDD88888DD8$ZZ$$ZOOOO
+7ZO$n7I$$$Z$7I~,,:,,.,=?:,,..     . ,:::~~I?:,......,,:,:=ZO888D88D8DO88O8888888
+77777$77$$7I?~,.. .,,,=+~..       ~+=:~+:+II+=~:,:..,,::~?ZODO888D88DD8DDDD8D88N
+?77???I?II?~:,.....=.:?+~.      ., .:?7I:::~::=+~~...,:~=?$OOOZ888OO8OO8888D8D8D
+7II??I+++~:,..    .,==$7+,.         .IZ7~~~~,~:++=:..::~++7ZZODDD8D888a8OOD88D88
+I???+~:,,,...    .=:=~I$$+,         .$7?+++++=+==+~,,:==+?78DDDDDDDO88OZOO88O888
+??+::,,... ...   .78Z7IZO=......    ,77:..:::.,~?+~::=++~?$8DDDN8D8O88O88OOOOO88
+~=~:,,,.,....     .:OO$Z$7...       ?$~ .......,:=~,:++==?$88D88D8ZOZOOZOOOO8DOO
+:~=+:,,.. .         ..,?$$+..        =...::,... ,~::~?===+OD88888OZOOOZO$ZOOZZZ8
+,~++++==..         ....~ZZO~.         .:~=~,,...:=~~$7?+?$DD8D8OOZZOZOZOOOO8O8O8
+.:=+==++,.       ...,.:+8DZ...I$7:.....,~=:,....+~?I7=?=$O8DDOOZ88OOO8OOOOOZZO88
+,:~===?d,        .:,:?OD8O...ZOO$$?I,...=~:,,,,~===?+?+77Z8OZ$Z$OOZZOOO8OOOOO8O8
+,:~=~~=+..       ..=Z8888$.+OZ8OOZ8O7,.::=:~~=~:+????I$$?7$$ZZZOOOOOOOOO8O8OOOOO
+,,:~~~+=..       ~ZO87I7Z,:7OOZOO?OD$~,:~:+?+==+?+=+77$?IOOZZZOOOOO8OOOOOOOOO888
+..,,~=+~..  .   =$OO:..+?.IZOOZOZ$OZ?=~=~=++=+:?III7$7I=7DD8ZZOO8OO88OO8ZOZ$ZOOO
+..... .... . ,~?7OZ7..:~I+ZZOO$OOOZZ$+7++?+??I777$$Z7I?~Z8D8OO$Z888O8888ZOZOZOO8
+,.....,~~==:=?$ZOZ7 .,~7IZZOZZZZOOOZO$I$Z$$Z$Z$ZZ7$I+==~DDDN8DDO$O88D8DDZO8OZ888
+=+=:~::=~~:+$ZZZ$+...I77$OZ$$IIZ$?$Z7=======~=++??==,::=D8D88D8D8ZOODOOOZZ8ZOaOO
+
+* install script
+* man page
+* deps
diff --git a/note.sh b/note.sh
new file mode 100755
index 0000000..9bdbf98
--- /dev/null
+++ b/note.sh
@@ -0,0 +1,87 @@
+#!/bin/bash
+
+WHERE=$( cd $(dirname $0) ; pwd -P )
+
+# default configs
+if [[ -e "$WHERE/CONFIG" ]]; then
+	source $WHERE/CONFIG
+fi
+
+OPTIND=1 #reset getopts
+
+while getopts t:f:b:s:r: opts; do
+	case $opts in
+		t)
+			TITLE=$OPTARG
+			;;
+		f)
+			FILE=$OPTARG
+			;;
+		b)
+			BIB=$OPTARG
+			;;
+		s)
+			STYLE=$OPTARG
+			;;
+		r)
+			REF=$OPTARG
+			;;			
+		?)
+			echo "invalid option -$OPTARG";
+			exit;
+			;;
+		:)
+			echo "option -$OPTARG requires an argument";
+			exit;
+			;;
+	esac
+done
+
+shift $((OPTIND-1))
+
+if [[ -z "$TITLE" ]]; then
+	echo "No title provided. Aborting."
+	exit;
+fi
+
+if [[ -d "$TITLE" ]]; then
+	read -p "Specified note already exists... Do you wish to continue? " yn
+	case $yn in
+        [Yy]* ) rm -r $TITLE; break;;
+        [Nn]* ) exit;;
+        * ) echo "Please answer yes or no.";;		
+	esac
+fi
+
+printf "\n-----\ntitle: $TITLE\nfile: $FILE\nbib: $BIB\ncsl: $STYLE\nref: $REF\nbibliographe: $BIBLIOGRAPHE_PATH\n-----\n"
+
+# output
+mkdir -p $TITLE
+
+# copy templates
+cp -aR $WHERE/template/* $TITLE
+
+cd $TITLE
+
+# file exists? copy to output
+[ -z "$FILE" ] && echo "No file to copy. Make sure to reference in text in the note!" || curl -O $FILE 
+
+# bibliography exists? fix makefile accordingly
+[ -z "$BIB" ] && echo "No bibliography" || sed -i.bak "s#BIB\ :=#BIB\ := $BIB#g" Makefile
+
+# csl style exists? fix makefile accordingly
+[ -z "$STYLE" ] && echo "No csl style" || sed -i.bak "s#CSL\ :=#CSL\ := $STYLE#g" Makefile
+
+if [ -z "$BIBLIOGRAPHE_PATH" ]; then
+	echo "No bibliographe"	
+else
+	node $BIBLIOGRAPHE_PATH/refactorbib.js --data $BIB > tmpbib.json
+	REFERENCE=$(node $BIBLIOGRAPHE_PATH/generatebib.js --data tmpbib.json --items [\"$REF\"] --output md)
+	echo $REFERENCE
+	rm tmpbib.json
+	sed -i.bak "s~*MACHINE-REF*~$REFERENCE~g" notes.mmd
+fi
+
+# cleanup
+rm *.bak
+cd ..
diff --git a/parse/parse.py b/parse/parse.py
new file mode 100755
index 0000000..e878eaf
--- /dev/null
+++ b/parse/parse.py
@@ -0,0 +1,118 @@
+#!/usr/bin/env python
+
+from statemachine import StateMachine
+import sys, string, re, json
+
+markups = {'QUOTES' : ('PAGE', 'pp', 'tags', 'quote', 'fpc'), 'NOTES' : ('NOTE', '#', 'tags', 'note', 'fpc')}
+output = {'QUOTES' : [], 'NOTES' : []}
+
+
+def error(cargo):
+	# Don't want to get here! Unidentifiable line
+	sys.stderr.write('Unidentifiable line:\n'+ line)
+
+def eof(cargo):
+	# Normal termination -- Cleanup code might go here.
+	sys.stdout.write('Processing Successful\n')	
+	fpindx = open('.indx','wb')
+	json.dump(output, fpindx)
+
+def parse(c):
+	fp, l = c
+	while 1:
+		line = fp.readline()
+		if not line: return eof, (fp, line)
+		if line[:2] == '##': return section(line), (fp, line)
+		else: continue
+
+def QUOTES(c):
+	fp, l = c
+	sys.stdout.write('QUOTES\n')		
+	while 1:
+		line = fp.readline()
+		if not line: return eof, (fp, line)
+		elif string.find(string.upper(line), 'PAGE') >= 0: return segment, (fp, line, 'QUOTES', markups['QUOTES'])
+		else: continue
+
+def NOTES(c):
+	fp, l = c
+	sys.stdout.write('NOTES\n')		
+	while 1:
+		line = fp.readline()
+		if not line: return eof, (fp, line)
+		elif string.find(string.upper(line), 'NOTE') >= 0: return segment, (fp, line, 'NOTES', markups['NOTES'])
+		else: continue
+
+def segment(c):
+	fp, l, sect, mk = c
+	m, x, tt, y, cnt = mk
+	c = '' 
+	t = [] 
+	q = ''
+	cc = ''
+	# identifier
+	c = ext_identifier(l)
+	while 1:
+		cursor = fp.tell()
+		line = fp.readline()
+		if not line: 
+			# transition: EOF - record entry
+			rec_segment(c, t, q, cc, (sect, x, tt, y, cnt))
+			return eof, (fp, line)
+		elif string.find(string.upper(line), m) >= 0: 
+			# transition: new segment - record entry
+			rec_segment(c, t, q, cc, (sect, x, tt, y, cnt))
+			return segment, (fp, line, sect, mk)
+		elif line[:1] == '<': 
+			# tags
+			t += ext_tags(line)
+			continue
+		elif line[:2] == '##': 
+			# transition: new section - record entry
+			rec_segment(c, t, q, cc, (sect, x, tt, y, cnt))
+			return section(line), (fp, line)
+		elif line == '\n' :
+			continue
+		else:
+			# text
+			if not cc:
+				cc = cursor
+			q += line
+			continue
+
+## helper fncts
+def section(line):
+	line = string.upper(line)
+	if string.find(line, 'NOTES') >= 0: return NOTES
+	elif string.find(line, 'QUOTES') >= 0: return QUOTES
+	elif string.find(line, 'REFERENCE') >= 0: return parse
+	else: return error
+
+def ext_identifier(line):
+	b = string.rsplit(line)
+	return b[-1]
+
+def ext_tags(line):
+	line = line.rstrip('\n').replace(' ','')
+	t = re.split('<|>', line)
+	return [v for v in t if v]
+
+def rec_segment(idf, tags, text, cnt, mk):
+	if not text:
+		print 'hmm... no quote on pp.', c
+		return None
+	section_i, idf_i, tags_i, text_i, cnt_i = mk
+	entry = {idf_i : idf, text_i : text, tags_i : tags, cnt_i : cnt}
+	output[section_i].append(entry)
+
+
+if __name__ == '__main__':
+	m = StateMachine();
+	m.add_state(parse)
+	m.add_state(NOTES)
+	m.add_state(QUOTES)
+	m.add_state(segment)
+	m.add_state(error, end_state=1)
+	m.add_state(eof, end_state=1)
+	m.set_start(parse)
+	m.run((sys.stdin, ''))
diff --git a/parse/statemachine.py b/parse/statemachine.py
new file mode 100644
index 0000000..2d50fe6
--- /dev/null
+++ b/parse/statemachine.py
@@ -0,0 +1,32 @@
+class InitializationError(Exception): pass
+class StateMachine:
+    def __init__(self):
+        self.handlers = []
+        self.startState = None
+        self.endStates = []
+
+    def add_state(self, handler, end_state=0):
+        self.handlers.append(handler)
+        if end_state:
+            self.endStates.append(handler)  
+
+    def set_start(self, handler):
+        self.startState = handler
+
+    def run(self, cargo=None):
+        if not self.startState:
+            raise InitializationError,\
+                  "must call .set_start() before .run()"
+        if not self.endStates:
+            raise InitializationError, \
+                  "at least one state must be an end_state"
+        handler = self.startState
+        while 1:
+            (newState, cargo) = handler(cargo)
+            if newState in self.endStates:
+                newState(cargo)
+                break
+            elif newState not in self.handlers:
+                raise RuntimeError, "Invalid target %s" % newState
+            else:
+                handler = newState
\ No newline at end of file
diff --git a/template/Makefile b/template/Makefile
new file mode 100644
index 0000000..8b3a713
--- /dev/null
+++ b/template/Makefile
@@ -0,0 +1,34 @@
+#output dir
+OUT := ./
+
+#csl - http://editor.citationstyles.org/
+CSL :=
+
+#bibliography file
+BIB :=
+
+#pdf
+PDF := $(patsubst %.mmd,$(OUT)%.pdf,$(wildcard *.mmd))
+
+$(OUT)%.pdf : %.mmd
+	pandoc $< -o $@
+
+#html
+HTML := $(patsubst %.mmd,$(OUT)%.html,$(wildcard *.mmd))
+
+$(OUT)%.html : %.mmd
+	pandoc $< -s --filter pandoc-citeproc --csl $(CSL) --bibliography $(BIB) -o $@
+
+all : dir $(HTML)
+
+index :
+	parse.py < $(wildcard *.mmd)
+                        
+clean :
+	rm -f $(HTML)
+	rm -f $(PDF)
+
+rebuild : clean all
+
+dir : 
+	mkdir -p $(OUT)
diff --git a/template/notes.mmd b/template/notes.mmd
new file mode 100644
index 0000000..2b851cb
--- /dev/null
+++ b/template/notes.mmd
@@ -0,0 +1,7 @@
+### Reference
+
+*MACHINE-REF
+
+### Quotes
+
+### Notes
\ No newline at end of file