python refactoring

bin/iiindex

@@ -0,0 +1,27 @@
+#!/usr/bin/env python
+
+import os, sys, glob
+
+from nnnotes import parse
+
+if __name__ == '__main__':
+
+	indexfile = '.indx'
+
+	notes = glob.glob('*.mmd')
+	if len(notes) > 1:
+		sys.exit('More or less *.mmd files than expected.')
+	elif len(notes) < 1:
+		sys.exit('No *.mmd in current directory.')
+
+	try:
+		note = open(notes[0], 'r+')
+	except:
+		sys.exit('Cannot open ' + notes[0])
+
+	with open(indexfile, 'w') as indx:
+		parse.run(note, indx)
+
+
+
+

bin/iiinject

@@ -0,0 +1,40 @@
+#!/usr/bin/env python
+
+import os, sys, glob, json
+
+from nnnotes import compare, inject
+
+if __name__ == '__main__':
+
+	indexfile = '.indx'
+
+	pdfs = glob.glob('*.pdf')
+	if len(pdfs) > 1:
+		sys.exit('More than one pdf in current directory. No obvious choice. Aborting.')
+
+	if len(pdfs) == 1:
+		pdf = pdfs[0]
+		if os.path.isfile(indexfile):
+			tmp = '.tmp'
+			os.system('plfr -json ' + pdf + ' > ' + tmp)     	### relying on plfr
+			diff = compare.run(indexfile, tmp)				### new highlights in pdf?
+			
+			with open(tmp, 'w') as fptmp:
+				json.dump(diff, fptmp)
+			indexfile = tmp
+
+		else:
+			os.system('plfr -json ' + pdf + ' > ' + indexfile)
+
+
+	notes = glob.glob('*.mmd')
+	if len(notes) > 1:
+		sys.exit('More or less *.mmd files than expected.')
+	elif len(notes) < 1:
+		sys.exit('No *.mmd in current directory.')
+
+	note = notes[0]
+	inject.run(note, indexfile)
+
+	if os.path.isfile('.tmp'):
+		os.remove('.tmp')

bin/nnnote

@@ -0,0 +1,83 @@
+#!/usr/bin/env python
+
+import os, sys, argparse, shutil, subprocess
+import getpass, time
+
+from nnnotes import TEMPLATE_PATH
+
+def yes_no(question):
+
+	sys.stdout.write(question)
+
+	yes = set(['yes','y', 'ye', ''])
+	no = set(['no','n'])
+
+	choice = raw_input().lower()
+	if choice in yes:
+	   return True
+	elif choice in no:
+	   return False
+	else:
+	   sys.stdout.write("Please respond with 'yes' or 'no'")
+
+def check_note_exists(title):
+
+	if os.path.isdir(title):
+		q = yes_no('The note already exists in the current directory.\nDo you want to proceed and erase the current note? [y/n] ')
+		if not q:
+			sys.exit('Notes already exists. Aborting.')
+		return True
+	return False
+
+
+if __name__ == '__main__':
+
+	p = argparse.ArgumentParser()
+	p.add_argument('-t', '--title', action="store", help="title of the note", required=True)
+	p.add_argument('-f', '--file', action="store", help="(pdf) file to extract notes from")
+	p.add_argument('-b', '--bibtex', action="store", help="bibtex file containing bibliographical information")
+	p.add_argument('-i', '--bibtexitem', action="store", help="name of the item in the bibtex file")
+	p.add_argument('-s', '--style', action="store", help="bibliographic style")
+
+	args = p.parse_args()
+
+	if not check_note_exists(args.title):
+		# make directory for the note
+		os.makedirs(args.title)
+
+	# copy template files -- this needs to change....
+	#home = os.path.dirname(os.path.realpath(__file__))
+	os.system('cp -aR ' + TEMPLATE_PATH + '/* ' + args.title)
+
+	os.chdir(args.title)
+
+	# copy note file if it exists
+	if args.file is not None and os.path.isfile(args.file):
+		shutil.copy2(args.file, os.path.basename(args.file))
+
+	# style
+	style_arg = ''
+	if args.style is not None:
+		os.system('sed -i.bak "s#CSL\ :=#CSL\ := ' + args.style + '#g" Makefile')
+		style_arg = '-s ' + args.style
+
+	# bibtex item
+	bibtexitem_arg = ''
+	if args.bibtexitem is not None:
+		bibtexitem_arg = '-i ' + args.bibtexitem
+
+	# generate bibliographic element
+	if args.bibtex is not None and os.path.isfile(args.bibtex):
+		os.system('sed -i.bak "s#BIB\ :=#BIB\ := ' + args.bibtex + '#g" Makefile')
+		ref = '> ' + subprocess.check_output('csl_unsorted ' + args.bibtex + ' ' + bibtexitem_arg + ' ' + style_arg + ' -f md', shell=True).rstrip()
+		os.system('sed -i.bak "s~*MACHINE-REF*~' + ref + '~g ; s~%\ title~%\ ' + ref + '~g" notes.mmd')
+
+	author = getpass.getuser()
+	date = time.strftime("%d/%m/%Y")
+
+	os.system('sed -i.bak "s~%\ author~%\ ' + author + '~g ; s~%\ date~%\ ' + date + '~g" notes.mmd')
+
+	# cleanup
+	os.system('rm *.bak')
+	os.chdir('..')
+